HistoQC
Automated quality control for whole-slide images.
Checks a batch of scanned slides for problems like blur or pen marks before anyone spends time on them.
- Cost
- Free
- Hardware
- Runs on any laptop
- Offline
- Works without a connection
- Your data
- Stays on your machine
- Licence
- BSD-3-Clause
- Maturity
- production
- From
- Case Western Reserve University
What it is
Pipeline that flags slide artefacts — blur, pen marks, tissue folds, coverslip edges, bubbles — and produces an interactive report for triaging a cohort before analysis.
Activity: 329 stars · last commit 2026-04-13 — refreshed nightly
Related
Catalogued 2026-08-01, last checked 2026-08-01. View the source record · Report an error